maharjun

Pinned Repositories

PolychronousGroupFind
This contains code to find polychronous neural groups as described by Szatmry B. and EM Izhikevich. The description in their paper is not very clear, and i have made assumptions in this code. This is complementary to Polychronization
Language:C++10
SimulationSpeedExp
This basically consists of the codes used to simulate the neural simulator (nyuh!) and optimize for speed. Used to test for Cache related shiz.
Language:C++10
TimeDelNetSim
This contains the base time delay neural network simulation coded with the Izhikevich Neuron model. This is used as the starting point for the other simulations. It contains MEX Interfacing and is designed to be able to implement a Causal and Anti-causal STDP Rule
Language:C++11
WorkingMemory
Contains the implementation of Working Memory as described Botond Szatmáry and Eugene Izhikevich.
Language:C++22

maharjun's Repositories

maharjun/WorkingMemory
Contains the implementation of Working Memory as described Botond Szatmáry and Eugene Izhikevich.
Language:C++22
maharjun/PolychronousGroupFind
This contains code to find polychronous neural groups as described by Szatmry B. and EM Izhikevich. The description in their paper is not very clear, and i have made assumptions in this code. This is complementary to Polychronization
Language:C++10
maharjun/TimeDelNetSim
This contains the base time delay neural network simulation coded with the Izhikevich Neuron model. This is used as the starting point for the other simulations. It contains MEX Interfacing and is designed to be able to implement a Causal and Anti-causal STDP Rule
Language:C++11
maharjun/bashsimplecurses
Automatically exported from code.google.com/p/bashsimplecurses
Language:Shell
maharjun/CMakeModules
This repository contains all the modules that I use in my cmake projects especially involving MEX and TBB.
Language:CMake
maharjun/dimenet
DimeNet and DimeNet++ models, as proposed in "Directional Message Passing for Molecular Graphs" (ICLR 2020) and "Fast and Uncertainty-Aware Directional Message Passing for Non-Equilibrium Molecules" (NeurIPS-W 2020)
maharjun/dotmap
Dot access dictionary for Python with ordered iteration and dynamic child creation
Language:Python
maharjun/GenericBuilder
Language:Python
maharjun/GetAttractionBasin
This is to get the basin of attraction of a given dynamical system
Language:C++1
maharjun/Grid2D
This contains some of the functions and classes that enable one to work with 2D grids.
Language:C++
maharjun/InputBuilder
Language:Python
maharjun/julia
The Julia Language: A fresh approach to technical computing.
Language:Julia
maharjun/lightdock
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
Language:C
maharjun/Meeko
A new Python package to prepare small molecules for docking.
maharjun/MexMemoryInterfacing
This Repo contains the set of headers and source files which store general purpose functions useful for handling Mex related functions
Language:C++3
maharjun/MLCompChem-research-meeting
This is a basic page that keeps track of all that we've done or intend to do in the ML/Comp Chem research meeting
maharjun/nest-simulator
The NEST simulator
Language:C++
maharjun/Neuro-Experiments
This is a repository that contains information and code specific to various experiments done using the TimeDelNetSim and other frameworks.
Language:Matlab
maharjun/ProDy
A Python Package for Protein Dynamics Analysis
maharjun/pytorch-minimize
Use scipy.optimize.minimize as a PyTorch Optimizer.
maharjun/recurrent-entity-networks
TensorFlow implementation of "Tracking the World State with Recurrent Entity Networks".
Language:Python
maharjun/RLHF-FLAN-T5-Anthropic
Performs RLHF learning using the FLAN-T5 transformer model with the Anthropic data
Language:Python
maharjun/rtbth-dkms
linux bluetooth dkms driver for rt3290 chip
Language:C
maharjun/SimManager-Hydra
A basic tutorial on how to use SimManager with Hydra
Language:Python
maharjun/SimManagerScripts
This is a repository that contains the various accessory scripts in order to make the use of the SimManager system more seamless
Language:Shell
maharjun/SimpleSimManager
A simple git based simulation manager that is used to ensure reproducability of simulations
Language:Python
maharjun/SLURMTaskBatcher
This contains a couple of scripts that can help in batching slurm tasks to have more fine-grained control over resource allocation
Language:Shell
maharjun/sumatra
Language:Python
maharjun/VectorizedNelderMead
an implementation of nelder-mead vectorised across initial points
Language:Python
maharjun/voronota
Voronota is a software tool for analyzing three-dimensional structures of biological macromolecules using the Voronoi diagram of atomic balls.