How to understad output ?
YuChrming opened this issue · 1 comments
YuChrming commented
Dear author,
I ran the ragoo pipline and got a goodish result.But I not really understand the result files, orders/orderings.txt, and groups/contigs.txt meaning.
orderings.txt:
ptg000244l - 0.0014127063882183142 0.6813073651220058
ptg000014l - 0.05063969092827449 0.8835199739787316
ptg001305l - 0.0021915977376244337 0.38366066557555917
ptg001332l - 0.0021915977376244337 0.38366066557555917
ptg000004l - 0.6282196481391924 0.934203313107705
What those numbers mean?Are they start and end positions?
orderings.txt:
ptg000004l 0.7479725314109346
ptg000014l 0.31663738688109305
ptg000244l 0.20284798017528835
ptg001305l 0.31718519802409223
ptg001332l 0.34471391570520366
What the numbers mean?
And, if I want to know what the place a contig is in the ragoo.fasta ,what should Ido ?
Really thanks !!