Pinned Repositories
EPI
Python solutions of Elements of Programming Interviews
genmap
GenMap - Fast and Exact Computation of Genome Mappability
isPCR
in silico PCR application
PriSeT
Tool for identifying primer sequences for metabarcoding experiments given a taxonomy and a reference database.
PriSeT_X_SADDLE
Use PriSeT computed primers and libraries for multiplex PCR via SADDLE.
mariehoffmann's Repositories
mariehoffmann/EPI
Python solutions of Elements of Programming Interviews
mariehoffmann/PriSeT
Tool for identifying primer sequences for metabarcoding experiments given a taxonomy and a reference database.
mariehoffmann/genmap
GenMap - Fast and Exact Computation of Genome Mappability
mariehoffmann/isPCR
in silico PCR application
mariehoffmann/PriSeT_X_SADDLE
Use PriSeT computed primers and libraries for multiplex PCR via SADDLE.
mariehoffmann/bioscripts
Scripts for processing and converting biological data files.
mariehoffmann/glitch-tool
A simple tool for messing up files. Used for creating glitch art.
mariehoffmann/greentools
Script collection for metagenomic tasks.
mariehoffmann/mariehoffmann.github.io
mariehoffmann/OpenMS
The codebase of the OpenMS project
mariehoffmann/phd_defense
Final presentation
mariehoffmann/plankton_database
A database schema for storing data from plankton metabarcoding experiments.
mariehoffmann/PriSeT_denovo
Primers computed by PriSeT
mariehoffmann/seqan
SeqAn's official repository.
mariehoffmann/seqan3
The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
mariehoffmann/seqan3_benchmarks
mariehoffmann/simple-resume-cv
Template for a simple resume or curriculum vitae (CV), in XeLaTeX.
mariehoffmann/tactac
Database facilitating information retrieval and data transformation tasks like association of references and taxids, taxonomic binning of a library and more.