markme123's Stars
dromara/x-file-storage
一行代码将文件存储到 本地、FTP、SFTP、WebDAV、谷歌云存储、阿里云OSS、华为云OBS、七牛云Kodo、腾讯云COS、百度云 BOS、又拍云USS、MinIO、 AWS S3、FastDFS、 Azure Blob Storage、金山云 KS3、美团云 MSS、京东云 OSS、天翼云 OOS、移动云 EOS、沃云 OSS、 网易数帆 NOS、Ucloud US3、青云 QingStor、平安云 OBS、首云 OSS、IBM COS、其它兼容 S3 协议的平台。后续即将支持 Samba、NFS
Visualize-ML/Book1_Python-For-Beginners
Book_1_《编程不难》 | 鸢尾花书:从加减乘除到机器学习;请多多批评指正!
kopia/kopia
Cross-platform backup tool for Windows, macOS & Linux with fast, incremental backups, client-side end-to-end encryption, compression and data deduplication. CLI and GUI included.
libnano/primer3-py
Simple oligo analysis and primer design
c-zhou/yahs
Yet another Hi-C scaffolding tool
shimlab/BLAZE
SingleCell Nanopore sequencing data analysis
hillerlab/TOGA
TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annotation, inferring orthologs and classifying genes as intact or lost.
xiaochuanle/Falign
An effective alignment tool for long noisy 3C data (e.g. Pore-C and C-walk)
yulab2021/TandemMod
cmdcolin/awesome-genome-visualization
A list of interesting genome browser or genome-browser-like implementations
nservant/HiC-Pro
HiC-Pro: An optimized and flexible pipeline for Hi-C data processing
aidenlab/3d-dna
3D de novo assembly (3D DNA) pipeline
aidenlab/juicer
A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
tjiangHIT/cuteSV
Long read based human genomic structural variation detection with cuteSV
nanoporetech/pod5-file-format
Pod5: a high performance file format for nanopore reads.
nanoporetech/remora
Methylation/modified base calling separated from basecalling.
nanoporetech/modkit
A bioinformatics tool for working with modified bases
d2l-ai/d2l-zh
《动手学深度学习》:面向中文读者、能运行、可讨论。中英文版被70多个国家的500多所大学用于教学。
epi2me-labs/wf-pore-c
massgravel/Microsoft-Activation-Scripts
A Windows and Office activator using HWID / Ohook / KMS38 / Online KMS activation methods, with a focus on open-source code and fewer antivirus detections.
refresh-bio/KMC
Fast and frugal disk based k-mer counter
open2c/cooler
A cool place to store your Hi-C
Tomas-M/iotop
A top utility for IO
xjtu-omics/HiCAT
HiCAT new project
nanoporetech/dorado
Oxford Nanopore's Basecaller
WarrenLab/minigraph-cactus-nf
a nextflow pipeline for creating a pangenome with minigraph-cactus
marbl/verkko
Telomere-to-telomere assembly of accurate long reads (PacBio HiFi, Oxford Nanopore Duplex, HERRO corrected Oxford Nanopore Simplex) and Oxford Nanopore ultra-long reads.
reflex-dev/reflex
🕸️ Web apps in pure Python 🐍
lh3/miniprot
Align proteins to genomes with splicing and frameshift
epi2me-labs/wf-single-cell