marschall-lab

Pinned Repositories

gaftools
General purpose utility related to GAF files
Language:Python8 2 120
GFAffix
GFAffix identifies walk-preserving shared affixes in variation graphs and collapses them into a non-redundant graph structure.
Language:Rust33 8 135
hrfs
Analysis of the set of founder sequences under a homologous recombination model
Language:Rust4 1 00
marschall-lab.github.io
Group website of the Marschall Lab
Language:SCSS01
panacus
Panacus is a tool for computing statistics for GFA-formatted pangenome graphs
Language:Rust67 4 224
panpa
PanPA is a tool for generating alignment of protein graphs
1 1 00
project-male-assembly
HGSVC SIG: targeted chromsome Y assembly
Language:Jupyter Notebook50
spp_dcj_v2
Language:C++00
strand-seq-graph-phasing
Language:R3 2 421

marschall-lab's Repositories

marschall-lab/panacus
Panacus is a tool for computing statistics for GFA-formatted pangenome graphs
Language:Rust67 4 224
marschall-lab/GFAffix
GFAffix identifies walk-preserving shared affixes in variation graphs and collapses them into a non-redundant graph structure.
Language:Rust33 8 135
marschall-lab/gaftools
General purpose utility related to GAF files
Language:Python8 2 120
marschall-lab/project-male-assembly
HGSVC SIG: targeted chromsome Y assembly
Language:Jupyter Notebook50
marschall-lab/hrfs
Analysis of the set of founder sequences under a homologous recombination model
Language:Rust4 1 00
marschall-lab/strand-seq-graph-phasing
Language:R3 2 421
marschall-lab/panpa
PanPA is a tool for generating alignment of protein graphs
1 1 00
marschall-lab/marschall-lab.github.io
Group website of the Marschall Lab
Language:SCSS01
marschall-lab/spp_dcj_v2
Language:C++00