Pinned Repositories
BTS
Bayesian model for prioritization of variants and tissue contexts.
clustering
project to explore clustering approaches
Columbia-Mathematics
Some lecture notes from Columbia courses, as well as notes and solved problems from individual readings.
Earthquake-Prediction
HiTMapper
An R package for visualization and relational analysis of cell states, based on the Mapper algorithm from topological data analysis.
HiTMapper_comparisons
Comparison of HiTMapper with manual gating and other algorithms
hmtl
🌊HMTL: Hierarchical Multi-Task Learning - A State-of-the-Art neural network model for several NLP tasks based on PyTorch and AllenNLP
INFERNO_eCAVIAR
A custom version of the colocalization method eCAVIAR, used for analyses with INFERNO pipeline and related.
Machine-Learning-Exercises
A collection of ML algorithms that I implemented from scratch in Python.
Tailor
An R package for clustering via Gaussian Mixture Modeling, optimized for heavy-tailed distributions in flow cytometry data.
matei-ionita's Repositories
matei-ionita/HiTMapper
An R package for visualization and relational analysis of cell states, based on the Mapper algorithm from topological data analysis.
matei-ionita/HiTMapper_comparisons
Comparison of HiTMapper with manual gating and other algorithms
matei-ionita/INFERNO_eCAVIAR
A custom version of the colocalization method eCAVIAR, used for analyses with INFERNO pipeline and related.
matei-ionita/Machine-Learning-Exercises
A collection of ML algorithms that I implemented from scratch in Python.
matei-ionita/Tailor
An R package for clustering via Gaussian Mixture Modeling, optimized for heavy-tailed distributions in flow cytometry data.
matei-ionita/BTS
Bayesian model for prioritization of variants and tissue contexts.
matei-ionita/clustering
project to explore clustering approaches
matei-ionita/Columbia-Mathematics
Some lecture notes from Columbia courses, as well as notes and solved problems from individual readings.
matei-ionita/Earthquake-Prediction
matei-ionita/hmtl
🌊HMTL: Hierarchical Multi-Task Learning - A State-of-the-Art neural network model for several NLP tasks based on PyTorch and AllenNLP
matei-ionita/MuSiC
Multi-subject Single Cell Deconvolution
matei-ionita/notes
Notes on assorted subjects/courses
matei-ionita/Penn-Mathematics
A bunch of solved exercises and notes that I'm writing as a grad student at UPenn.
matei-ionita/simulated_data_flow
Some code to generate flow cytometry-like data from a Gaussian mixture, with small variation between subjects.