maurya-anand
Bioinformatics Programmer with professional experience in the development of next-generation sequencing (NGS) tools, pipelines, databases, and web applications.
Oxford
Pinned Repositories
akm0001
ARA
ARA.v1.6.0
coursera.cicd.lab
Making Data Science Work for Clinical Reporting: CI/CD Lab
covid19live
getBamDepth
A script to report depth of coverage from BAM/SAM/CRAM file or parse the output generated from "samtools depth"
liftover
Convert genomic coordinates from the Human Genome version 19 (hg19) to version 38 (hg38)
netflix-react
netflix clone app
nf-varcall
A Nextflow pipeline for variant calling and annotation using PacBio Hi-Fi sequencing reads.
react-dictionary
maurya-anand's Repositories
maurya-anand/addinslist
📜 Discover and install useful RStudio addins
maurya-anand/akm0001
maurya-anand/netflix-react
netflix clone app
maurya-anand/react-dictionary
maurya-anand/bioinformatics
:microscope: Path to a free self-taught education in Bioinformatics!
maurya-anand/biomisc_R
command line bioinformatic scripts written in R
maurya-anand/Blast2Bam
Blast2Bam uses the XML results of Blastn, the reference and the fastQ or fasta file(s) to output a SAM file.
maurya-anand/coding-interview-university
A complete computer science study plan to become a software engineer.
maurya-anand/common-workflow-language
Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊
maurya-anand/covidstats
Live tracking of Covid19 cases
maurya-anand/developer-roadmap
Roadmap to becoming a web developer in 2021
maurya-anand/dna-seq-neoantigen-prediction
Snakemake workflow for neoantigen prediction
maurya-anand/EBI_cancer_workshop_visualization
EBI cancer workshop course materials
maurya-anand/free-programming-books
:books: Freely available programming books
maurya-anand/genomics-in-the-cloud
Source code and related materials for the O'Reilly book
maurya-anand/H3ABionet-SOPs
Standard operating procedures for H3ABionet data processing and analyses
maurya-anand/igv-webapp
IGV Web App
maurya-anand/insect_genome_assemblies
scripts used to download and analyze insect assemblies from GenBank
maurya-anand/iSkyLIMS
is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.
maurya-anand/JHU-DS-Notes
Compiled Notes for all 9 courses in the Coursera Data Science Specialization
maurya-anand/kaggle-solutions
🏅 Collection of Kaggle Solutions and Ideas 🏅
maurya-anand/learn-wdl
Educational materials for learning WDL
maurya-anand/markdowns
repository with the markdowns of all of our analyses.
maurya-anand/public-apis
A collective list of free APIs
maurya-anand/py-bokeh-notebooks
Interactive Web Plotting with Bokeh in IPython notebook
maurya-anand/react-advanced-2020
maurya-anand/rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
maurya-anand/shinyjs
💡 Easily improve the user experience of your Shiny apps in seconds
maurya-anand/terra-quick-start-wdl
A working space for developing a master vault of template notebooks for DSPs User Ed
maurya-anand/vcfR
Tools to work with variant call format files