Pinned Repositories
cellpose
a generalist algorithm for cellular segmentation
F-TGMM
Forked Tracking with Gaussian Mixture Models (F-TGMM) for use with linux CUDA-compatible systems.
max-brambach.github.io
microglia_centrosome
Repository containing the code used for parts of the analysis of the paper "A role for the centrosome in regulating the rate of neuronal efferocytosis by microglia in vivo" by K. Möller et al.
MVRegFus
Python module for registering and fusing multi-view microscopy data
neural_tube_patterning_paper
Repository containing the code used in the paper "Neural tube patterning: from a minimal model for rostrocaudal patterning towards an integrated 3D model" by M. Brambach et al. (https://doi.org/10.1016/j.isci.2021.102559).
nuQLOUD
Analysis framework for the generation of organisational features from point clouds.
oyFlow
Flow cytometry analysis, eventually
tgmm_utility
vedo
A python module for scientific analysis of 3D objects based on VTK
max-brambach's Repositories
max-brambach/nuQLOUD
Analysis framework for the generation of organisational features from point clouds.
max-brambach/F-TGMM
Forked Tracking with Gaussian Mixture Models (F-TGMM) for use with linux CUDA-compatible systems.
max-brambach/microglia_centrosome
Repository containing the code used for parts of the analysis of the paper "A role for the centrosome in regulating the rate of neuronal efferocytosis by microglia in vivo" by K. Möller et al.
max-brambach/MVRegFus
Python module for registering and fusing multi-view microscopy data
max-brambach/neural_tube_patterning_paper
Repository containing the code used in the paper "Neural tube patterning: from a minimal model for rostrocaudal patterning towards an integrated 3D model" by M. Brambach et al. (https://doi.org/10.1016/j.isci.2021.102559).
max-brambach/tgmm_utility
max-brambach/vedo
A python module for scientific analysis of 3D objects based on VTK
max-brambach/cellpose
a generalist algorithm for cellular segmentation
max-brambach/max-brambach.github.io
max-brambach/oyFlow
Flow cytometry analysis, eventually
max-brambach/python-pcl
Python bindings to the pointcloud library (pcl)
max-brambach/seaborn-data
Data repository for seaborn examples
max-brambach/voro
Voro++: a three-dimensional Voronoi cell library in C++