maximilianh/cellBrowser

Issues

• cannot convert float infinity to integer

  #197 opened 4 years ago
  4

• Metadata in the panel on the left does not update on cell hover

  #196 opened 4 years ago
  1

• assert(len(newName)!=0) when there is only one cluster in dataset.

  #195 opened 4 years ago
  15

• Given a very large AnnData object, what would be the minimal AnnData fields that are required by CellBrowser?

  #193 opened 2 years ago
  8

• Blank page when use example data

  #192 opened 4 years ago
  18

• select cells based on intersection of annotations

  #191 opened 4 years ago
  9

• no js files after cbBuild on develop

  #190 opened 3 years ago
  2

• feature request: split view based on annotation

  #189 opened 4 years ago
  7

• URL not working?

  #188 opened 3 years ago
  14

• change labeling in layout

  #187 opened 3 years ago
  10

• define dataRoot via command-line argument or environmental variable?

  #185 opened 4 years ago
  3

• Exporting mtx format, strange gene values

  #183 opened 4 years ago
  2

• UMAP and tSNE not picked up on AnnData with multiple embeddings

  #179 opened 4 years ago
  6

• Concatenation of int with str throws error for gene symbols and ids

  #177 opened 4 years ago
  1

• Marker gene box is not closable by Esc

  #176 opened 4 years ago
  5

• cbBuild on sample data throws TypeError: argument of type 'NoneType' is not iterable

  #174 opened 4 years ago
  3

• color buckets distribution after sctransform normalization

  #173 opened 3 years ago
  15

• is it possible to compare gene expression of one selected group vs another?

  #172 opened 4 years ago
  6

• Following a standard scanpy pipeline errors on cbBuild (resolveOutDir)

  #170 opened 5 years ago
  1

• Following a standard scanpy pipeline example gives index error

  #169 opened 3 years ago
  4

• blank cluster canvas

  #167 opened 5 years ago
  2

• Single datasets direct entry into viewer (skip selection) for usage in Galaxy

  #166 opened 4 years ago
  5

• Font-size for cluster title

  #165 opened 2 years ago
  6

• sparse matrix format

  #164 opened 5 years ago
  8

• Categorical data's name column isn't sortable

  #163 opened 3 years ago
  2

• display expression values in 2d bins

  #162 opened 5 years ago
  6

• desc.conf is not used ?

  #161 opened 3 years ago
  5

• feature request: heatmap to show marker genes for selected cluster

  #160 opened 5 years ago
  0

• Sharing or local hosting

  #159 opened 3 years ago
  10

• Color error in the browser

  #158 opened 4 years ago
  22

• Resize the side panels.

  #157 opened 5 years ago
  13

• help with cell annotations

  #156 opened 5 years ago
  3

• Incorrect external URL for HCA Human Pancreas

  #155 opened 5 years ago
  3

• Password for each data set

  #154 opened 5 years ago
  8

• cbUpgrade errors (0.5.49 -> current develop branch)

  #153 opened 3 years ago
  4

• Example data not working with v0.7.3?

  #152 opened 5 years ago
  12

• cbBuild --init exit with status 1?

  #151 opened 5 years ago
  5

• Feature request: option to change or suppress the "direct link for manuscripts" in the abstract

  #150 opened 5 years ago
  2

• Feature request: add an option to suppress the "Open" button

  #149 opened 5 years ago
  3

• Firefox-specific errors

  #148 opened 5 years ago
  9

• tmpFname not defined

  #147 opened 5 years ago
  5

• New collection format leaves message hidden behind dataset list

  #146 opened 5 years ago
  6

• Readthedocs typo

  #142 opened 5 years ago
  7

• minimal.conf example not working

  #141 opened 5 years ago
  8

• Color by gene expression not working on dev

  #140 opened 5 years ago
  2

• Autism dataset infomation is off

  #139 opened 5 years ago
  7

• Restructure help docs

  #137 opened 5 years ago
  0

• Create a Cell Browser tutorial

  #136 opened 3 years ago
  7

• Custom annotations improvements

  #135 opened 5 years ago
  4

• After parsing metadata columns, column "None" is expected which exits browser build

  #134 opened 5 years ago
  4