maxlcummins/pipelord

Issues

• Package conflict in abritamr

  #35 opened a year ago
  0

• ECtyper name column is wrong

  #31 opened 2 years ago
  0

• QC workflow bug

  #30 opened 2 years ago
  0

• kraken workflow inconsistently defines database for kraken and bracken when downloaded db is used

  #25 opened 2 years ago
  0

• kma installation spits out stdout into the snakemake log

  #24 opened 2 years ago
  0

• Bracken executable is not in environment

  #15 opened 2 years ago
  1

• dfast fails with blastn 2.10

  #14 opened 2 years ago
  1

• kraken simple summary generation breaks pipeline on non linux OS

  #13 opened 2 years ago
  1

• missing BLAST installation and krakendb

  #12 opened 2 years ago
  1

• summary files incorrectly generated with addition of new samples following previous run

  #10 opened 3 years ago
  0

• Move blast bin path from pointfinder workflow to config file

  #5 opened 3 years ago
  0

• greedy solver warning

  #3 opened 2 years ago
  0

• Snakemake log attachment causes final job fail

  #2 opened 4 years ago
  0

• Create a save jobID for nohup in Snakefile

  #1 opened 2 years ago
  1