mayunlong89
Genetics, Single cell sequencing, Bioformatics for complex diseases
University of PennsylvaniaPhilly
Pinned Repositories
PBC_project
Integrative genomics analysis for PBC
scPagwas_main
Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data
Brain_eye_comorbidity
ctDRTF
a computational method for identifying cell type-specific transcription factor relevant to complex diseases
scPagwas_reproduce
reproduce scPagwas code
scHOB
Host_genetics_for_COVID-19
COVID19_scRNA
Random_walkers
Random Walk
brain-cell-type-peak-files
H3K27ac ChIPseq, H3K4me3 ChIPseq, ATACseq peak files for neurons, microglia, oligodendrocytes and astrocytes
mayunlong89's Repositories
mayunlong89/ctDRTF
a computational method for identifying cell type-specific transcription factor relevant to complex diseases
mayunlong89/code11-MR
mayunlong89/single_cell_genetics
mayunlong89/ImmModCoV
mayunlong89/scHOB
mayunlong89/Brain_eye_comorbidity
mayunlong89/SQANTI3
Tool for the Quality Control of Long-Read Defined Transcriptomes
mayunlong89/Host_genetics_for_COVID-19
mayunlong89/scHuman_organoids_COVID19
mayunlong89/sccomp
Testing differences in cell type proportions from single-cell data.
mayunlong89/DeepRBP
mayunlong89/Azimuth_mapping_celltype_annotation.R
mayunlong89/PBC_project
Integrative genomics analysis for PBC
mayunlong89/ctdrtf_training
mayunlong89/SCARlink
mayunlong89/ma_group.github.io
mayunlong89/awesome-cell-cell-communication
Collection of computational tools for cell-cell communication inference for single-cell and spatially resolved omics
mayunlong89/scDrugPrio
Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease
mayunlong89/scPagwas_main
Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data
mayunlong89/COVID19_scRNA
mayunlong89/MIES
mayunlong89/scDrugHunter
mayunlong89/SCAVENGE
SCAVENGE is a method to optimize the inference of functional and genetic associations to specific cells at single-cell resolution.
mayunlong89/gchromVAR
Cell type specific enrichments using finemapped variants and quantitative epigenetic data
mayunlong89/scPagwas_reproduce
reproduce scPagwas code
mayunlong89/Random_walkers
Random Walk
mayunlong89/longbow
Annotation and segmentation of MAS-seq data
mayunlong89/2022-Machine-Learning
吴恩达机器学习笔记2022
mayunlong89/SQANTI
mayunlong89/snATAC_in_house_pipeline