mayunlong89

mayunlong89's Stars

• mayunlong89/single_cell_genetics

  1

• mayunlong89/scPagwas_reproduce

  reproduce scPagwas code

  1

• sulab-wmu/scPagwas

  Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data

  Language:R329

• mayunlong89/GSSG

  Gene Set + S2G strategy annotations analyzed for disease architecture

  1

• erwinerdem/STEAP

  Single cell Type Enrichment Analysis for Phenotypes (STEAP)

  Language:Jupyter Notebook93

• kharchenkolab/pagoda2

  R package for analyzing and interactively exploring large-scale single-cell RNA-seq datasets

  Language:JavaScript20447

• clagiamba/moloc

  Language:R325

• chr1swallace/coloc

  Repo for the R package coloc

  Language:R14244

• MRCIEU/gwasglue

  Linking GWAS data to analytical tools in R

  Language:R11239

• GreenleafLab/MPAL-Single-Cell-2019

  Publication Page for MPAL Paper 2019

  Language:R7638

• dengchunyu/TIP

  The source code of web server TIP, including example data.

  Language:R165

• wu-yc/scMetabolism

  Quantifying metabolism activity at the single-cell resolution

  Language:R10943

• perslab/CELLECT

  CELLECT (CELL-type Expression-specific integration for Complex Traits)

  Language:Python6919

• mayunlong89/COVID19_scRNA

  Language:R31

• saeyslab/nichenetr

  NicheNet: predict active ligand-target links between interacting cells

  Language:R467116

• sunduanchen/Scissor

  Scissor package

  Language:C++17631

• mayunlong89/brain-cell-type-peak-files

  H3K27ac ChIPseq, H3K4me3 ChIPseq, ATACseq peak files for neurons, microglia, oligodendrocytes and astrocytes

  1

• mayunlong89/Subdyquency

  data and code for Subdyquency

  Language:R1

• mayunlong89/MultiXcan_configure

  1

• mayunlong89/repeated_measure_ANOVA

  Language:R1

• mayunlong89/MIES-project

  1

• mayunlong89/MIES

  Language:R1

• mayunlong89/Random_walkers

  Random Walk

  Language:R2

• PickrellLab/gwas-pw-paper

  Language:TeX137

• mayunlong89/Host_genetics_for_COVID-19

  Language:R41

• mayunlong89/comparative_analysis.py

  Script used for comparing the results from Sherlock analysis and MAGMA analysis at 3 different thresholds of P values

  Language:Python1

• mayunlong89/co_expression_pattern.R

  Language:R12

• mayunlong89/MDS

  This is a R script for clustering significant pathways identified by using MDS and Jaccard distance

  Language:R1

• mayunlong89/ichorCNA

  Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.

  1