mcale6

Pinned Repositories

GA-IPA
Combining GA and IPA to infer paralog pairing
Language:Julia1 1 11
FastFold
Optimizing AlphaFold Training and Inference on GPU Clusters
Language:Python0 0 00
ftdmp
FTDMP is a software system for running docking experiments and scoring/ranking multimeric models.
Language:C++00
mcale6
Config files for my GitHub profile.
0 1 00
muscle5
Multiple sequence alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and predicted structures.
Language:Jupyter Notebook00
evodiff
Generation of protein sequences and evolutionary alignments via discrete diffusion models
Language:Python488 15 3571
PepPrCLIP
De Novo Peptide Generation for a Protein Target
Language:Jupyter Notebook1 2 10
tinygrad
You like pytorch? You like micrograd? You love tinygrad! ❤️
Language:Python26.6k 273 7552.9k

mcale6's Repositories

mcale6/FastFold
Optimizing AlphaFold Training and Inference on GPU Clusters
Language:Python0 0 00
mcale6/ftdmp
FTDMP is a software system for running docking experiments and scoring/ranking multimeric models.
Language:C++00
mcale6/mcale6
Config files for my GitHub profile.
0 1 00
mcale6/muscle5
Multiple sequence alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and predicted structures.
Language:Jupyter Notebook00