mdozmorov
Bioinformatician, interested in 3D genomics, cancer, statistics, programming, machine and deep learning
Pinned Repositories
Bioinformatics_notes
Bioinformatics and genomics resources
Cancer_notes
A continually expanding collection of cancer genomics notes and data
HiC_data
A (continuously updated) collection of references to Hi-C data. Predominantly human/mouse Hi-C data, with replicates.
HiC_tools
A collection of tools for Hi-C data analysis
MachineLearning_notes
Machine learning and deep learning resources
scATAC-seq_notes
scATAC-seq data analysis tools and papers
scHiC_notes
Notes on single-cell Hi-C technologies, tools, and data
scRNA-seq_notes
A list of scRNA-seq analysis tools
Statistics_notes
Statistics, data analysis tutorials and learning resources
TCGAsurvival
Scripts to analyze TCGA data
mdozmorov's Repositories
mdozmorov/scRNA-seq_notes
A list of scRNA-seq analysis tools
mdozmorov/HiC_tools
A collection of tools for Hi-C data analysis
mdozmorov/MachineLearning_notes
Machine learning and deep learning resources
mdozmorov/HiC_data
A (continuously updated) collection of references to Hi-C data. Predominantly human/mouse Hi-C data, with replicates.
mdozmorov/Statistics_notes
Statistics, data analysis tutorials and learning resources
mdozmorov/scATAC-seq_notes
scATAC-seq data analysis tools and papers
mdozmorov/Cancer_notes
A continually expanding collection of cancer genomics notes and data
mdozmorov/scHiC_notes
Notes on single-cell Hi-C technologies, tools, and data
mdozmorov/Bioinformatics_notes
Bioinformatics and genomics resources
mdozmorov/MDnotes
Links to all data science, genomics, and other notes
mdozmorov/RNA-seq_notes
A continually expanding collection of RNA-seq tools
mdozmorov/Aging_clock
Data and papers related to epigenetic clocks predicting age
mdozmorov/SNP_notes
Notes on SNP-related tools and genome variation analysis
mdozmorov/ChIP-seq_notes
Notes on ChIP-seq and other-seq-related tools
mdozmorov/R_notes
Data science in R notes
mdozmorov/RNA-seq
RNA-seq analysis scripts
mdozmorov/Methylation_notes
Notes on DNA methylation analysis
mdozmorov/Programming_notes
Programming-related notes
mdozmorov/CTCF
Genomic coordinates of FIMO-predicted CTCF binding sites using JASPAR and other PWMs, human and mouse genome assemblies including mm39 and T2T. Also included experimentally derived ENCODE SCREEN CTCF-bound CREs.
mdozmorov/BIOS658_2025
BIOS 658. Statistical Methods for High-throughput Genomics Data I
mdozmorov/BIOS691_deep_learning_R_2025
mdozmorov/DeepCode
"DeepCode: Open Agentic Coding (Paper2Code & Text2Web & Text2Backend)"
mdozmorov/MDtemplate
A template for coding in RMarkdown
mdozmorov/awesome_spatial_omics
tools and notes for spatial omics
mdozmorov/BioC2026
conference website for Bioconductor 2026
mdozmorov/BioC_template
mdozmorov/gbcc2025
mdozmorov/GitHub_metrics
mdozmorov/Talk_VCU_Physiology_2024-10-24
"3D genomics of drug resistance in breast cancer" presentation in the Department of Physiology, VCU
mdozmorov/test-git