mdozmorov
Bioinformatician, interested in 3D genomics, cancer, statistics, programming, machine and deep learning
Pinned Repositories
Bioinformatics_notes
Bioinformatics and genomics resources
Cancer_notes
A continually expanding collection of cancer genomics notes and data
HiC_data
A (continuously updated) collection of references to Hi-C data. Predominantly human/mouse Hi-C data, with replicates.
HiC_tools
A collection of tools for Hi-C data analysis
Immuno_notes
Immunology-related bioinformatics data and tools
MachineLearning_notes
Machine learning and deep learning resources
scATAC-seq_notes
scATAC-seq data analysis tools and papers
scRNA-seq_notes
A list of scRNA-seq analysis tools
Statistics_notes
Statistics, data analysis tutorials and learning resources
TCGAsurvival
Scripts to analyze TCGA data
mdozmorov's Repositories
mdozmorov/scRNA-seq_notes
A list of scRNA-seq analysis tools
mdozmorov/HiC_tools
A collection of tools for Hi-C data analysis
mdozmorov/MachineLearning_notes
Machine learning and deep learning resources
mdozmorov/HiC_data
A (continuously updated) collection of references to Hi-C data. Predominantly human/mouse Hi-C data, with replicates.
mdozmorov/TCGAsurvival
Scripts to analyze TCGA data
mdozmorov/Cancer_notes
A continually expanding collection of cancer genomics notes and data
mdozmorov/scATAC-seq_notes
scATAC-seq data analysis tools and papers
mdozmorov/Statistics_notes
Statistics, data analysis tutorials and learning resources
mdozmorov/Immuno_notes
Immunology-related bioinformatics data and tools
mdozmorov/Bioinformatics_notes
Bioinformatics and genomics resources
mdozmorov/scHiC_notes
Notes on single-cell Hi-C technologies, tools, and data
mdozmorov/MDnotes
Links to all data science, genomics, and other notes
mdozmorov/RNA-seq_notes
A continually expanding collection of RNA-seq tools
mdozmorov/SNP_notes
Notes on SNP-related tools and genome variation analysis
mdozmorov/ChIP-seq_notes
Notes on ChIP-seq and other-seq-related tools
mdozmorov/Aging_clock
Data and papers related to epigenetic clocks predicting age
mdozmorov/R_notes
Data science in R notes
mdozmorov/Methylation_notes
Notes on DNA methylation analysis
mdozmorov/Programming_notes
Programming-related notes
mdozmorov/BIOS668.2018
Web site for "Statistical Methods for High-throughput Genomic Data II" BIOS 668 course, Spring 2018 https://mdozmorov.github.io/BIOS668.2018
mdozmorov/Jobs_notes
Notes for job seekers
mdozmorov/Python_notes
Data science in Python notes
mdozmorov/CTCF
Genomic coordinates of FIMO-predicted CTCF binding sites using JASPAR and other PWMs, human and mouse genome assemblies including mm39 and T2T. Also included experimentally derived ENCODE SCREEN CTCF-bound CREs.
mdozmorov/Data_notes
Lists of publicly available datasets for machine learning
mdozmorov/2024-04-19.TCGA
The Cancer Genomics Atlas (TCGA) and other cancer genomics resources
mdozmorov/ATAC-seq
Basic workflow for ATAC-seq analysis
mdozmorov/EuroBioC2024
mdozmorov/GitHub_metrics
mdozmorov/IntroR
Intro to R workshop for UVa Library StatLab
mdozmorov/MDtemplate
A template for coding in RMarkdown