This repository contains resources and supplementary materials for the medspaCy workshop presentation at MedInfo 2023 in Sydney, Australia.
The hands-on component of the workshop will be presented in the
Jupyter notebook: ./MedInfo-2023-NLP-with-medspaCy.ipynb, which can be run in Colab
using the following link:
Below are some links for other tutorials, videos, and examples of code using medspaCy.
- The original medspaCy paper (Proceedings of the AMIA 2021 Symposium)
- medspaCy documentation notebooks, including detailed examples of each component
- Melbourne COMP-90089: A short medspaCy NLP module offered by the University of Melbourne, including YouTube videos and Colab notebooks
- University of Utah PHS Data Science Workshop: A week-long workshop offered by the University of Utah Department of Population Health Science with a module focused on NLP with medspaCy
Here is a Google Sheets document that contains an (incomplete) running list of papers/clinical NLP systems that use medspaCy. If you have a system that uses medspaCy, let us know!