/Intro-to-qCMB-2022

Class work for Intro to qCMB

Introduction to Quantitative Cell and Molecular Biology, 2022 (CM580A3)

Bioinformatics Image

Course material is available here.

  1. Module 1 - R and RStudio
  2. Module 2 - RMarkdown

For Instructors

Knitting RMarkdown documents

TeX for knitting to PDF

  • MiKTeX on Windows
  • MaCTeX 2013+ on Mac.

Too much output (max.print)

Many students last year had an RStudio with a default max.print of 10000... which led to documents being turned in that were hundreds of pages. It can be easily handled in the setup chunk.

```{r setup, include=FALSE}
knitr::opts_chunk$set(echo = TRUE)

options(max.print=100)
```