melsiddieg
Post-Doctoral Fellow, Bioinformatician Centre for Molecular Medicine and Therapeutics, University of British Columbia
University of British ColumbiaVancouver, Canada
Pinned Repositories
cellbaseR
An R client for CellBase, the OpenCB project
EnsGenes
furly
LearningSparkV2
This is the github repo for Learning Spark: Lightning-Fast Data Analytics [2nd Edition]
llama2.zig
Inference Llama 2 in one file of pure Zig
Mycetoma_Map
tajmeeaton
تجميعة من المشاريع، وخصوصا مفتوحة المصدر، للنهوض باللغة العربية والأمة. 👨💻 👨🔬👨🏫🧕
uniprot_annot
Variant_catalogue_pipeline
Variant catalogue pipeline
melsiddieg's Repositories
melsiddieg/cellbaseR
An R client for CellBase, the OpenCB project
melsiddieg/llama2.zig
Inference Llama 2 in one file of pure Zig
melsiddieg/New_Collabs
melsiddieg/AIONER
AIONER
melsiddieg/AlpacaDataCleaned
Alpaca dataset from Stanford, cleaned and curated
melsiddieg/annotated_deep_learning_paper_implementations
🧑🏫 59 Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, ...), gans(cyclegan, stylegan2, ...), 🎮 reinforcement learning (ppo, dqn), capsnet, distillation, ... 🧠
melsiddieg/uniprot_annot
melsiddieg/BioREx
melsiddieg/cellbase
High-Performance NoSQL database and RESTful web services to access to most relevant biological data
melsiddieg/coding_exercise_TCGA_infiltration
coding exercise using TCGA immune infiltration data
melsiddieg/CROssBAR-BioCypher-Migration
This is a repo for migration of CROssBAR data to the Neo4j database via BioCypher
melsiddieg/ETL-Synthea
A package supporting the conversion from Synthea CSV to OMOP CDM
melsiddieg/innovationgraph
GitHub Innovation Graph
melsiddieg/Introductory_Course
melsiddieg/llm-chatbot-python
https://graphacademy.neo4j.com/courses/llm-chatbot-python/
melsiddieg/LLMs4OL
LLMs4OL: Large Language Models for Ontology Learning
melsiddieg/localGPT
Chat with your documents on your local device using GPT models. No data leaves your device and 100% private.
melsiddieg/mini-lesson
Rayeval presentation
melsiddieg/ml_timeline
melsiddieg/mojo
The Mojo Programming Language
melsiddieg/NaLLM
Repository for the NaLLM project
melsiddieg/pc
melsiddieg/py-course
melsiddieg/RWKV-LM
RWKV is an RNN with transformer-level LLM performance. It can be directly trained like a GPT (parallelizable). So it's combining the best of RNN and transformer - great performance, fast inference, saves VRAM, fast training, "infinite" ctx_len, and free sentence embedding.
melsiddieg/safari
Convolutions for Sequence Modeling
melsiddieg/sv_data
melsiddieg/tomasonjblogs
Jupyter notebooks that support my graph data science blog posts at https://bratanic-tomaz.medium.com/
melsiddieg/transformers
melsiddieg/Variant_catalogue_pipeline
CAFE pipeline
melsiddieg/VisionFive2