merenlab/merenlab.org

error in gff_parser.py

Closed this issue · 1 comments

Dear Sir,
Followed the instruction of 'web/_posts/anvio/2017-05-18-working-with-prokka.md' at https://github.com/merenlab/web/blob/master/_posts/anvio/2017-05-18-working-with-prokka.md, and run

 python gff_parser.py prokka/sample.gff --gene-calls gene_calls.txt --annotation gene_annot.txt

I got an error of gff_parser.py which appears in line 43 as:

File "gff_parser.py", line 43, in <module>
    source, version = feature.source.split(':')
ValueError: not enough values to unpack (expected 2, got 1)

Could you please take a look at that? Thank you.

meren commented

Not the right place to report this. This is the web repository. Please submit an issue to the relevant repository.