Atlas 2.13 installation problem

[gaworj]

Hello,

Thank you for great pipeline.

I have previously succesfully used v.2.9.1

Today wanted to install newest atlas and encountered such error:

mamba create -n atlas-2-13 -y -c bioconda -c conda-forge metagenome-atlas=2.13

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    mamba (0.25.0) supported by @QuantStack

    GitHub:  https://github.com/mamba-org/mamba
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Looking for: ['metagenome-atlas=2.13']

pkgs/main/linux-64 No change
pkgs/r/noarch No change
pkgs/main/noarch No change
pkgs/r/linux-64 No change
bioconda/linux-64 4.5MB @ 3.8MB/s 1.4s
bioconda/noarch 4.1MB @ 2.4MB/s 1.9s
conda-forge/noarch 10.9MB @ 3.4MB/s 3.5s
conda-forge/linux-64 29.1MB @ 3.8MB/s 8.7s
Encountered problems while solving:

• package metagenome-atlas-2.13.0-pyhdfd78af_0 requires pyarrow >=8, but none of the providers can be installed

The same problem appears when I try to install metagenome-atlas without suffix "==2.13".

Any hints?

Bests,
Jan

[SilasK]

I don't see why it doesn't work.

Try to install metagenome atlas in a fres conda environment (see docs).

You have a linux, do you?
Any success with installing pyarrow directly ?

[SilasK]

does it work now?