Handle all CIGAR cases.

Question

Handle all CIGAR cases.

Closed this issue 11 years ago · 3 comments

mgymrek commented 11 years ago

Currently only I/M/D are handled

Answer 1 · 2014-02-05T04:15:46.000Z

Is this what causes this error from hard-clipped bases (H)?
TypeError: 'NoneType' object is not iterable

Answer 2 · 2014-02-05T12:06:24.000Z

It's possible. Could you copy the traceback from the error message here? I am currently working on this issue.

Answer 3 · 2014-02-06T03:24:35.000Z

I have implemented all cigar options and added test cases for them in this commit . closing this issue. If you are still having problems you can open a new issue or email me with more details about the error.