Pinned Repositories
anvio
An analysis and visualization platform for 'omics data
c-blosc
A blocking, shuffling and loss-less compression library that can be faster than `memcpy()`.
clixov
cq-notebooks
Notebooks for answering competency questions
ddot
Toolkit for constructing, analyzing, and visualizing data-driven ontologies
ffn
Flood-Filling Networks for instance segmentation in 3d volumes.
fishers_exact_test
Fishers Exact Test for Python (Cython)
MobMess
ontotype
Constructing and analyzing ontotypes
PlasX
PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture
michaelkyu's Repositories
michaelkyu/PlasX
PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture
michaelkyu/ddot
Toolkit for constructing, analyzing, and visualizing data-driven ontologies
michaelkyu/MobMess
michaelkyu/ontotype
Constructing and analyzing ontotypes
michaelkyu/anvio
An analysis and visualization platform for 'omics data
michaelkyu/c-blosc
A blocking, shuffling and loss-less compression library that can be faster than `memcpy()`.
michaelkyu/clixov
michaelkyu/cq-notebooks
Notebooks for answering competency questions
michaelkyu/ffn
Flood-Filling Networks for instance segmentation in 3d volumes.
michaelkyu/fishers_exact_test
Fishers Exact Test for Python (Cython)
michaelkyu/hiview
HiView: the universal viewer for hierarchical data
michaelkyu/mentorship-survey-workflow
michaelkyu/pickle-blosc
Read and write Pickle files using Blosc compression.
michaelkyu/platon
Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.
michaelkyu/scikit-learn-fasterRF
A fork of the scikit-learn (https://github.com/scikit-learn/scikit-learn) project. The RandomForestRegressor class has been optimized for faster training.
michaelkyu/sourmash
Compute and compare MinHash signatures for DNA data sets.
michaelkyu/web
Web content for Meren Lab