/MSBench

Build benchmark for microsatellite genotyping with HGSVC assembly contigs

Primary LanguagePythonOtherNOASSERTION

MSBench

Build benchmark with assembly contigs for short tandem repeats detection.

plese see the help of each command

If you have any question about this software, please contact with Peng Jia (pengjia@stu.xjtu.edu.cn)

benchmark

  • build benchmark for ccs assembly contig (short tandem repeat)
    • for on haplotype (√)
    • merge two haplotype (√)
  • build benchmark for ccs assembly contig (more long tandem repeat)
    • for on haplotype (√)
    • merge two haplotype (√)