Pinned Repositories
c_basic
cbs
A simple implementation of the circular binary segmentation algorithm in python
cnvkit
Copy number variant detection from targeted DNA sequencing
cytoscape
Cytoscape: an open source platform for network analysis and visualization
DALIGNER
Find all significant local alignments between reads
FALCON-Phase
FALCON-Phase integrates PacBio long-read assemblies with Phase Genomics Hi-C data to create phased, diploid, chromosome-scale scaffolds
free-programming-books-zh_CN
:books: 免费的计算机编程类中文书籍，欢迎投稿
goatools
Python scripts to find enrichment of GO terms
HapCUT2
software tools for haplotype assembly from sequence data
htslib
C library for high-throughput sequencing data formats
milkcookie's Repositories
milkcookie/c_basic
milkcookie/cbs
A simple implementation of the circular binary segmentation algorithm in python
milkcookie/cnvkit
Copy number variant detection from targeted DNA sequencing
milkcookie/cytoscape
Cytoscape: an open source platform for network analysis and visualization
milkcookie/DALIGNER
Find all significant local alignments between reads
milkcookie/FALCON-Phase
FALCON-Phase integrates PacBio long-read assemblies with Phase Genomics Hi-C data to create phased, diploid, chromosome-scale scaffolds
milkcookie/free-programming-books-zh_CN
:books: 免费的计算机编程类中文书籍，欢迎投稿
milkcookie/goatools
Python scripts to find enrichment of GO terms
milkcookie/HapCUT2
software tools for haplotype assembly from sequence data
milkcookie/htslib
C library for high-throughput sequencing data formats
milkcookie/jasmine_genome
some script for jasmine genome project
milkcookie/LDBlockShow
LDBlockShow: a fast and effective tool for Show Region Linkage disequilibrium heatmap Figure analysis based on variant call format files
milkcookie/leetcode
milkcookie/leetcode-1
LeetCode题解，151道题完整版
milkcookie/leetCode-2
:pencil2: 算法相关知识储备 LeetCode with Python :books:
milkcookie/leetcode-3
LeetCode in pure C
milkcookie/LGR
this is a develop pipeline for LGR with C language.
milkcookie/milkcookie.github.io
milkcookie/ntcounter
milkcookie/polymapR
Unlinked clone of git@github.com:cran/polymapR.git
milkcookie/python_script
some python script for bioinformatics
milkcookie/SALSA
SALSA: A tool to scaffold long read assemblies with Hi-C data
milkcookie/simple_slide_window
a simple script for slice fasta sequence
milkcookie/SNP_detection
a pipeline for SNP detection
milkcookie/srccode
some useful lib code
milkcookie/statsintro_python
Python modules and IPython Notebooks, for the book "Introduction to Statistics With Python"
milkcookie/sver
DNA Structural Variants Finder for NGS
milkcookie/tensorflow
An Open Source Machine Learning Framework for Everyone