Pinned Repositories
awesome-public-datasets
A topic-centric list of HQ open datasets. PR ☛☛☛
awesome-single-cell
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
Bilibili-WenDao
Algorithm & DataSet for Machine Learning
blastdb_nt-nr
blast nt nr db create and scientific name count.
CBNplot_for_bulk_cell_talk
Bayesian network plot for the enrichment analysis results
CELL-STEM-CELL-isthmus-stem-cells
ChatGPT-Academic-Prompt
Use ChatGPT for academic writing
CrossTalkeR
R package to do the Ligand Receptor Analysis Visualization
DPPI
A convolutional neural network to predict PPI interactions
millersan's Repositories
millersan/awesome-public-datasets
A topic-centric list of HQ open datasets. PR ☛☛☛
millersan/awesome-single-cell
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
millersan/blastdb_nt-nr
blast nt nr db create and scientific name count.
millersan/CBNplot_for_bulk_cell_talk
Bayesian network plot for the enrichment analysis results
millersan/CELL-STEM-CELL-isthmus-stem-cells
millersan/ChatGPT-Academic-Prompt
Use ChatGPT for academic writing
millersan/CrossTalkeR
R package to do the Ligand Receptor Analysis Visualization
millersan/dynmethods
A collection of 50+ trajectory inference methods within a common interface 📥📤
millersan/ImmuCC
Cell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data.
millersan/Mahendralingam-et-al.-Nat-Metab
millersan/MPAL-Single-Cell-2019
Publication Page for MPAL Paper 2019
millersan/MultiK_try
MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via a multi-resolution perspective.
millersan/report
:scroll: :tada: Automated reporting of objects in R
millersan/rimmi.rnaseq
set of functions for genomics data analysis
millersan/scMetabolism
Quantifying metabolism activity at the single-cell resolution
millersan/scMiko
R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-cell analytic work flows.
millersan/scripts
bioinformatics script
millersan/scrna_seurat_pipeline
comprehensive analysis of single-cell transcriptomics data
millersan/scRNAseq-Gut-IFNB-IFNL
millersan/sepsis
Top-performing algorithm for DII National Data Science Challenge
millersan/sepsis3-mimic
Evaluation of the Sepsis-3 guidelines in MIMIC-III
millersan/seurat-wrappers
Community-provided extensions to Seurat
millersan/sig-bio-shiny
A standalone R shiny application for doing significant biology on a set of genes
millersan/singlecell_downstream
millersan/singlecell_pip
millersan/singlecellglioma-verhaaklab
millersan/sinto
Tools for single-cell data processing
millersan/SSMD_for_bulk_cell_talk
millersan/trust
An interactive guide to the game theory of cooperation
millersan/wishbone
Wishbone is an algorithm to align cells along developmental trajectories with branches