Getting Error in "ASSEMBLING MT GENOMES WITH ASSEMBLEMTGENOME..." step
Closed this issue · 1 comments
Nirmal2310 commented
Hi @clody23 @domenico-simone @ma-diroma @robertopreste, I am using MToolBox for assembling human mitochondrial genome with simulated reads as input. I am getting an error in the assembling part of the pipeline and I am attaching the configuration file as well as the log file of the run here.
I request you to please suggest what is wrong with my pipeline and how can I resolve it. I will be very thankful to you all.
My code:
MToolBox.sh -i sim_hiseq_exponential.conf -a "-t 16" -m "-t 16"
Config file:
sim_hiseq_exponential.conf.txt
The total reads are 250K per fastq file.
Please tell me if you need anything else from my side.
Thank you very much.