mkatsanto
Doctorate in computational biology, interested in omics, RNA regulation and workflow development.
Biozentrum, University of BaselBasel, Switzerland
Pinned Repositories
bioconda-recipes
Conda recipes for the bioconda channel.
riboseq-flow
A Nextflow DSL2 pipeline to perform ribo-seq data analysis and comprehensive quality control.
APAeval
Community effort to evaluate computational methods for the detection and quantification of poly(A) sites and estimating their differential usage across RNA-seq samples
Dockerfiles
Dockerfile repository of the Zavolan Lab
RCRUNCH
Workflow for automated (e)CLIP analysis. From raw fastq to peak calling and motif analysis.
zarp
The Zavolab Automated RNA-seq Pipeline
zarp-cli
A user-friendly command-line interface for the ZARP RNA-seq analysis workflow
mkatsanto's Repositories
mkatsanto doesn’t have any repository yet.