morispi

PhD in Bioinformatics. Mostly working on long-read error correction and SV calling.

GenScale - INRIA

Pinned Repositories

bioconda-recipes
Conda recipes for the bioconda channel.
Language:Shell1.7k 96 1.9k3.3k
ELECTOR
ELECTOR: EvaLuator of Error Correction Tools for lOng Reads
Language:C15 5 163
bamtools
C++ API & command-line toolkit for working with BAM data
Language:C++0 0 00
bioconda-recipes
Conda recipes for the bioconda channel.
Language:Shell0 0 00
CONSENT
Scalable long read self-correction and assembly polishing with multiple sequence alignment
Language:C++55 4 365
HG-CoLoR
Hybrid method based on a variable-order de bruijn Graph for the error Correction of Long Reads
Language:C++10 3 172
kPers
Language:C++0 1 01
LEVIATHAN
Linked-reads based structural variant caller with barcode indexing
Language:C++3 4 112
LRez
Standalone tool and library allowing to work with barcoded linked-reads
Language:C++12 4 75
stageINRIA
Language:Python0 0 00

morispi's Repositories

morispi/CONSENT
Scalable long read self-correction and assembly polishing with multiple sequence alignment
Language:C++55 4 365
morispi/LRez
Standalone tool and library allowing to work with barcoded linked-reads
Language:C++12 4 75
morispi/HG-CoLoR
Hybrid method based on a variable-order de bruijn Graph for the error Correction of Long Reads
Language:C++10 3 172
morispi/LEVIATHAN
Linked-reads based structural variant caller with barcode indexing
Language:C++3 4 112
morispi/bamtools
C++ API & command-line toolkit for working with BAM data
Language:C++0 0 00
morispi/bioconda-recipes
Conda recipes for the bioconda channel.
Language:Shell0 0 00
morispi/kPers
Language:C++0 1 01
morispi/stageINRIA
Language:Python0 0 00