mourisl
Assistant Professor at the Department of Biomedical Data Science at Dartmouth. Interested in designing algorithms and developing bioinformatics methods.
Geisel School of Medicine at Dartmouth College
mourisl's Stars
lh3/ref-gen
Human reference genome analysis sets
DingWB/PyComplexHeatmap
PyComplexHeatmap: A Python package to plot complex heatmap (clustermap)
ENCODE-DCC/rna-seq-pipeline
mbhall88/compression_benchmark
Benchmarking FASTQ compression with 'mature' compression algorithms
alevar/ORFanage
Ultra-efficient and sensitive method to search for Open Reading Frames in spliced genomes guided by reference annotation to maximize protein similarity within genes.
vgteam/vg
tools for working with genome variation graphs
simd-everywhere/simde
Implementations of SIMD instruction sets for systems which don't natively support them.
crazyhottommy/compbio_tutorials
My youtube programming scripts
huangnengCSU/compleasm
A genome completeness evaluation tool based on miniprot
oma219/spumoni
Pan-Genomic Matching Statistics
Qile0317/APackOfTheClones
Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of clonal expansion at a single cell resolution, by representing expanded clones as differently sized circles.
BEETL/BEETL
BEETL
PacificBiosciences/pb-metagenomics-tools
Tools and pipelines tailored to using PacBio HiFi Reads for metagenomics
dnbaker/bioseq
Tokenizers and Machine Learning Models for biological sequence data
kaizhang/SnapATAC2
Single-cell epigenomics analysis tools
RagnarGrootKoerkamp/alg-viz
String algorithm visualizations
bnprks/BPCells
Scaling Single Cell Analysis to Millions of Cells
IEDB/TCRMatch
tlemane/kmindex
Index kmtricks bf matrices
kundajelab/chrombpnet
Bias factorized, base-resolution deep learning models of chromatin accessibility (chromBPNet)
rmcelreath/stat_rethinking_2023
Statistical Rethinking Course for Jan-Mar 2023
shenwei356/easy_sbatch
easy_sbatch - Batch submitting Slurm jobs with script templates
maickrau/GraphAligner
kjenike/panagram
refresh-bio/agc
Assembled Genomes Compressor
algbio/themisto
Space-efficient pseudoalignment with a colored de Bruijn graph
potulabe/symphonypy
Port of symphony algorithm of single-cell reference atlas mapping to Python
lucidrains/enformer-pytorch
Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch
garrettj403/SciencePlots
Matplotlib styles for scientific plotting
hms-dbmi/cistrome-explorer
Interactive visual analytic tool for exploring epigenomics data w/ associated metadata, powered by HiGlass and Gosling