mrikasper
An MR physicist based in Toronto. Trying to enhance fMRI sensitivity by efficient acquisition (spirals), recon & noise characterization (field+physiological).
Toronto Neuroimaging Facility (ToNI), University of TorontoToronto, Canada
Pinned Repositories
GIRFReco.jl
An Open-Source End-to-End Pipeline for Spiral Magnetic Resonance Image (MRI) Reconstruction in Julia
arbitration
Code supporting the paper for "Neural Arbitration between Social and Individual Learning Systems"
brainhack-physio
Demo for PhysIO and single subject analysis (GLM) using public fMRI data towards model comparison (MACS toolbox)
DECAES.jl
DEcomposition and Component Analysis of Exponential Signals (DECAES) - a Julia implementation of the UBC Myelin Water Imaging (MWI) toolbox for computing voxelwise T2-distributions of multi spin-echo MRI images.
julia-recon-advances-in-spiral-fmri
Example undersampled spiral image reconstruction with static B0 correction using MRIReco.jl for data published with Paper "Advances in Spiral fMRI"
MRIReco.jl
Julia Package for MRI Reconstruction
paper-advances-in-spiral-fmri
Analysis and Representation Code for scientific paper "Advances in Spiral fMRI: A High-resolution Study with Single-shot Acquisition"
rrsg-arbitrary-sense
Repository for ISMRM Reproducible Research Study Group Challenge 2019
tapas
TAPAS - Translational Algorithms for Psychiatry-Advancing Science
mrikasper's Repositories
mrikasper/paper-advances-in-spiral-fmri
Analysis and Representation Code for scientific paper "Advances in Spiral fMRI: A High-resolution Study with Single-shot Acquisition"
mrikasper/julia-recon-advances-in-spiral-fmri
Example undersampled spiral image reconstruction with static B0 correction using MRIReco.jl for data published with Paper "Advances in Spiral fMRI"
mrikasper/brainhack-physio
Demo for PhysIO and single subject analysis (GLM) using public fMRI data towards model comparison (MACS toolbox)
mrikasper/arbitration
Code supporting the paper for "Neural Arbitration between Social and Individual Learning Systems"
mrikasper/DECAES.jl
DEcomposition and Component Analysis of Exponential Signals (DECAES) - a Julia implementation of the UBC Myelin Water Imaging (MWI) toolbox for computing voxelwise T2-distributions of multi spin-echo MRI images.
mrikasper/MRIReco.jl
Julia Package for MRI Reconstruction
mrikasper/neurocontainers
The containers can be used in combination with our transparent singularity or neurocommand tool, that wrap the executables inside a container to make them easily available for pipelines
mrikasper/neurodesk.github.io
mrikasper/niQC
NeuroImaging Quality Control (niQC)
mrikasper/Physio_Help
mrikasper/spm
Statistical Parametric Mapping
mrikasper/tapas
TAPAS - Translational Algorithms for Psychiatry-Advancing Science