RefTrans
Set of scripts that using a reference and GeneWise to translate transcritome data.
Run the INSTALL script to get paths set up for most things. In the translate.sh script, you need to put in the blast path.
To run:
translate.sh Speciesname Fasta_file_to_be_translated Nucleotide_blastdb_of_reference Threads Amino_acids_for_ref