Pinned Repositories
neusomatic
NeuSomatic: Deep convolutional neural networks for accurate somatic mutation detection
rnacocktail
SIFTER
A pipeline for large-scale phylogeny-based protein function prediction using SIFTER (Statistical Inference of Function Through Evolutionary Relationships)
bamsurgeon
tools for adding mutations to existing .bam files, used for testing mutation callers
convert2bed
Convert common binary and text genomic formats to BED
cyclecloud-projects
Repo for CycleCloud Projects
fusioncatcher
Finder of Somatic Fusion Genes in RNA-seq data
IDP
IDP is a statistical isoform prediction method to construct possible isoform candidates from the union of long reads and short reads with spliced alignment
metasv
MetaSV: An accurate and integrative structural-variant caller for next generation sequencing
somaticseq
An ensemble approach to accurately detect somatic mutations using SomaticSeq
msahraeian's Repositories
msahraeian/bamsurgeon
tools for adding mutations to existing .bam files, used for testing mutation callers
msahraeian/convert2bed
Convert common binary and text genomic formats to BED
msahraeian/cyclecloud-projects
Repo for CycleCloud Projects
msahraeian/fusioncatcher
Finder of Somatic Fusion Genes in RNA-seq data
msahraeian/IDP
IDP is a statistical isoform prediction method to construct possible isoform candidates from the union of long reads and short reads with spliced alignment
msahraeian/metasv
MetaSV: An accurate and integrative structural-variant caller for next generation sequencing
msahraeian/somaticseq
An ensemble approach to accurately detect somatic mutations using SomaticSeq