mtop

beagle_optimiser

Beagle_optimiser is a program written in Python that takes an XML input file prepared for BEAST, or a NEXUS file prepared for MrBayes, and finds the beagle option that will result in the shortest analysis time of that file.

gefes

Genome Extraction From Environmental Sequencing

mtop.github.io

Build a Jekyll blog in minutes, without touching the command line.

mtop.github.io_my

neotropics_pipeline

ngs

Tools for handling and analysing High throughput sequencing data

pythoncourseVT19

reciprocal_blast

speciesgeocoder

Species locality data + polygons -> nexus file.

misc

Miscellaneous scripts

mtop/speciesgeocoder

Species locality data + polygons -> nexus file.

mtop/beagle_optimiser

Beagle_optimiser is a program written in Python that takes an XML input file prepared for BEAST, or a NEXUS file prepared for MrBayes, and finds the beagle option that will result in the shortest analysis time of that file.

mtop/ngs

Tools for handling and analysing High throughput sequencing data

mtop/reciprocal_blast

mtop/gefes

Genome Extraction From Environmental Sequencing

mtop/mtop.github.io

Build a Jekyll blog in minutes, without touching the command line.

mtop/mtop.github.io_my

mtop/neotropics_pipeline

mtop/pythoncourseVT19

mtop/reads2trees

Pipeline for analysis of sequence capture

mtop/shell_scripts

Miscellaneous shellscripts for doing various bioinformatic analyses.

mtop/swc-test-repo