multitalk
Single-cell omics; Cell-cell communication; Spatial omics
Zhejiang UniversityHangzhou, China
Pinned Repositories
awesome-cell-cell-communication
Collection of computational tools for cell-cell communication inference for single-cell and spatially resolved omics
awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
Beautiful-Visualization-with-python
python数据可视化之美
miRTalk
Extracellular vesicle-derived miRNA-mediated cell-cell communication inference for single-cell transcriptomic data
scCrossTalk
Infer and visualize cell-cell communication for single-cell RNA-seq data
SpatialKidney
CellTalkDB
A manually curated database of literature-supported ligand-receptor interactions in human and mouse
scCATCH
Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data
scDeepSort
Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network
SpaTalk
Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data
multitalk's Repositories
multitalk/awesome-cell-cell-communication
Collection of computational tools for cell-cell communication inference for single-cell and spatially resolved omics
multitalk/scCrossTalk
Infer and visualize cell-cell communication for single-cell RNA-seq data
multitalk/miRTalk
Extracellular vesicle-derived miRNA-mediated cell-cell communication inference for single-cell transcriptomic data
multitalk/SpatialKidney
multitalk/awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
multitalk/Beautiful-Visualization-with-python
python数据可视化之美
multitalk/CCL-cGPS-1
CCL-cGPS: a clinical genomics-guided prioritizing strategy enables accurately selecting proper cancer cell lines for biomedical research
multitalk/CellChat
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
multitalk/cellphonedb
multitalk/CellTalkDB
A manually curated database of literature-supported ligand-receptor interactions in human and mouse
multitalk/clash_for_windows_pkg
A Windows/macOS GUI based on Clash
multitalk/DeepSort
Reference-free Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network
multitalk/garnett
Automated cell type classification
multitalk/Giotto
Single-cell spatial analysis toolbox
multitalk/github-readme-stats
:zap: Dynamically generated stats for your github readmes
multitalk/listen1_desktop
one for all free music in china (Windows, Mac, Linux desktop)
multitalk/lx-music-desktop
一个基于 electron 的音乐软件
multitalk/MouseLR-atlas
A single-cell spatial-temporal transcriptomic atlas of normal and fibrotic liver regeneration
multitalk/multinichenetr
multitalk/multitalk
multitalk/nichenetr
NicheNet: predict active ligand-target links between interacting cells
multitalk/PPMS
Pri-miRNA profiling for single-cell RNA-seq data
multitalk/scCATCH
Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data
multitalk/scmap
A tool for unsupervised projection of single cell RNA-seq data
multitalk/seurat
R toolkit for single cell genomics
multitalk/SiGra
Single-cell spatial elucidation through image-augmented graph transformer
multitalk/SingleCellSignalR_v1
R package
multitalk/SingleR
SingleR: Single-cell RNA-seq cell types Recognition (legacy version)
multitalk/SpaTalk
Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data
multitalk/spatial-datasets
overview of spatial datasets