Pinned Repositories
slurm-jupyter
A script for automating startup of a jupyter server on compute note - from you local machine.
project-guide
Guide on how to do a data analysis project on the cluster
geneinfo
Functions using mygene to show gene summaries and gene annotation plots in Jupyter
horizonplot
Horizon plots using matplotlib and seaborn.
interference_map
Experiment to compute cumulative linked selection on a site
widgetplots
Interactive widget plots for teaching use
davide-intern
baboons
Master repo for baboon project
hic-spermatogenesis
Chromatin Compartments and Selection on X
x-gwas
GWAS on chrX
munch-group's Repositories
munch-group/slurm-jupyter
A script for automating startup of a jupyter server on compute note - from you local machine.
munch-group/geneinfo
Functions using mygene to show gene summaries and gene annotation plots in Jupyter
munch-group/interference_map
Experiment to compute cumulative linked selection on a site
munch-group/.github
munch-group/analysis-template
Template repository
munch-group/ariadna-intern
Ariadnas internship project
munch-group/asd-xwas
X chromosome GWAS for ASD
munch-group/baboons
Master repo for baboon project
munch-group/bioinformatics
Lecture notes for bioinformatics and programming
munch-group/bird-hotspots
Analysis of hotspot sharing across birds
munch-group/davide-intern
munch-group/exercise-client
Client for launching docker with jupyterlab
munch-group/genominterv
Intervals on genomes
munch-group/hic-spermatogenesis
Sørens speciale projekt
munch-group/learning-python
Undergrad introduction to programming using Python
munch-group/libraryname
Template for python library
munch-group/munch-group.github.io
Group web site
munch-group/phase-type-distributions
munch-group/plotwidgets
Widgets for interactive plotting in Jupyter notebooks
munch-group/project-guide
Guide on how to do a data analysis project on the cluster
munch-group/projectname
Template project for analysis project
munch-group/PtDAlgorithms
Extremely fast and scalable algorithms for phase-type distributions (including discrete, multivariate, rewarded, and time-inhomogeneous). Interface to both C and R
munch-group/repositoryname
Template for data analysis project
munch-group/rfmix
GWF workflow for RFmix
munch-group/sjup
Utility for running and accessing JupyterLab on a remote compute cluster
munch-group/treestats
Experimenting with tree statistics
munch-group/vscode-markdown-url-extension
VS Code extension customising how Readcube urls are rendered when dragged into markdown or quarto
munch-group/widgetplots
Interactive widget plots for teaching use
munch-group/x-gwas
GWAS on chrX
munch-group/y-haplo-assignment
Assignment of chipped individuals to y haplogroup based in diagnostic SNPs