Pinned Repositories
Analysis-Driver
Pipelines for Illumina HiSeqX demultiplexing, sequence QC and variant calling.
EGCG-Core
Shared functionality across EGCG projects
Fastq-Filterer
Filtering tiles and short reads from paired-end fastq files.
Reporting-App
A Flask web app for presenting bcl2fastq and variant calling performance reports from Analysis-Driver
mwhamgenomics.github.io
nf-core-docs
Documentation rendering for nf-core community pipelines
PySplit
A command line speedrun timer
mwhamgenomics's Repositories
mwhamgenomics/nf-core-docs
Documentation rendering for nf-core community pipelines
mwhamgenomics/PySplit
A command line speedrun timer
mwhamgenomics/mwhamgenomics.github.io
mwhamgenomics/2022-05-19-test-workshop
Test carpentries workshop
mwhamgenomics/cocin_ccp
Pull and prep of CO-CIN Clinical Characterisation Protocol data from REDCap
mwhamgenomics/lc-shell
Library Carpentry: The UNIX Shell
mwhamgenomics/moleculardymics
Workflow for molecular dynamics simulation of proteins
mwhamgenomics/opencga
An Open Computational Genomics Analysis platform for big data processing and analysis in genomics
mwhamgenomics/Pykyll
A static site builder that does what I want
mwhamgenomics/Rustq-Filterer
Rust implementation of EdinburghGenomics/Fastq-Filterer
mwhamgenomics/seqtk
Toolkit for processing sequences in FASTA/Q formats