/phyloPCA

code and manuscript for phylo pca paper

Primary LanguageRGNU General Public License v2.0GPL-2.0

Comparative analysis of principal components can be misleading

This is the repo for our project investigating the statistical and conceptual issues involved in using PCA and Phylogenetic PCA in comparative analyses. It is a collaborative project between Josef Uyeda, Daniel Caetano and Matthew Pennell.

The repo contains two directories

/doc

Tex files and figures for the manuscript

/analysis

All code and data to reproduce the analyses