mwpennell
Associate Professor of Quantitative and Computational Biology at USC
University of Southern CaliforniaLos Angeles, USA
Pinned Repositories
arbutus
Assessing the adequacy of phylogenetic models of quantitative trait evolution
capwire
capwire r pacakge
geiger-v2
A suite of methods and models for studying evolutionary radiations
henaodiaz_2019_trees
repo of phylogenies
phyloPCA
code and manuscript for phylo pca paper
publications
PDFs of Pennell Lab Research Papers
r-phylo
phylogenetic comparative methods in R
thesis-style
Thesis style for the University of Idaho
traitmodels-wme
Tutorials for working with trees in R
ubc-biol548o-w2020
course materials for BIOL 548O Dealing with Data
mwpennell's Repositories
mwpennell/geiger-v2
A suite of methods and models for studying evolutionary radiations
mwpennell/arbutus
Assessing the adequacy of phylogenetic models of quantitative trait evolution
mwpennell/phyloPCA
code and manuscript for phylo pca paper
mwpennell/capwire
capwire r pacakge
mwpennell/ubc-biol548o-w2020
course materials for BIOL 548O Dealing with Data
mwpennell/thesis-style
Thesis style for the University of Idaho
mwpennell/henaodiaz_2019_trees
repo of phylogenies
mwpennell/publications
PDFs of Pennell Lab Research Papers
mwpennell/r-phylo
phylogenetic comparative methods in R
mwpennell/traitmodels-wme
Tutorials for working with trees in R
mwpennell/macro_sadler
Apparent time-dependency of macroevolutionary diversification rates
mwpennell/acid
A-Ci Database
mwpennell/biol-548o
Materials for Dealing with Data Course
mwpennell/chromrevolver
Generate input files for ChromEvol using the Chromosome Counts Database and the chromer package
mwpennell/dissertation
Contents of my PhD dissertation
mwpennell/dwd
Materials for dealing with data graduate moduel
mwpennell/extinction-timetree
Testing whether model non-identifiability can explain low extinction rate estimates
mwpennell/fuse
Analysis of sex chromosome fusions
mwpennell/handson-ml2
A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.
mwpennell/maker
Make-like declarative workflows in R
mwpennell/mwpennell.github.io
Website of Matt Pennell
mwpennell/poole
The Jekyll Butler. A no frills responsive Jekyll blog theme.
mwpennell/tsr
R code for examining effects of temperature size rule on consumer resource dynamics
mwpennell/vert_trans
Analysis of sex chromosome evolution across the phylogeny of vertebrates