myrtlecat

Oxford, UK

Pinned Repositories

bonito
A PyTorch Basecaller for Oxford Nanopore Reads
Language:Python00
dotvim
My vim configuration
Language:Vim Script00
Gibthon
Gibthon Construct Designer - an interactive design tool for primers for use in the Gibson Assembly method.
Language:JavaScript00
HelPopGen
Tools for doing population statistics using NGS data from Heliconius butterflies.
Language:Python00
minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
Language:C00
pysam
Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.
Language:C00
scikit-video
Video processing routines for SciPy
Language:Python00
scrappie
Scrappie is a technology demonstrator for the Oxford Nanopore Research Algorithms group
Language:C90 53 4127
taiyaki
Training models for basecalling Oxford Nanopore reads
Language:Python114 40 10142
pysam
Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtools, bcftools, and tabix.
Language:Cython773 47 919274

myrtlecat/bonito
A PyTorch Basecaller for Oxford Nanopore Reads
Language:Python00
myrtlecat/dotvim
My vim configuration
Language:Vim Script00
myrtlecat/Gibthon
Gibthon Construct Designer - an interactive design tool for primers for use in the Gibson Assembly method.
Language:JavaScript00
myrtlecat/HelPopGen
Tools for doing population statistics using NGS data from Heliconius butterflies.
Language:Python00
myrtlecat/minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
Language:C00
myrtlecat/pysam
Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.
Language:C00
myrtlecat/scikit-video
Video processing routines for SciPy
Language:Python00