nadiadavidson

Pinned Repositories

bioconda-recipes
Conda recipes for the bioconda channel.
Language:Shell0 0 00
CrypticVariant
Language:C1 2 00
geneLenDataBase
Language:R0 1 00
get_splice_counts
Language:C++0 1 01
goseq
Language:R1 1 21
remove_splice_clips
Language:C++1 2 00
Corset
Software for clustering de novo assembled transcripts and counting overlapping reads
Language:C++68 8 2018
JAFFA
JAFFA is a multi-step pipeline that takes either raw RNA-Seq reads, or pre-assembled transcripts, then searches for gene fusions
Language:C++78 5 9320
Lace
Building SuperTranscripts: A linear representation of transcriptome data
Language:Python67 11 3819
MINTIE
Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.
Language:Python33 7 367

nadiadavidson's Repositories

nadiadavidson/CrypticVariant
Language:C1 2 00
nadiadavidson/goseq
Language:R1 1 21
nadiadavidson/remove_splice_clips
Language:C++1 2 00
nadiadavidson/bioconda-recipes
Conda recipes for the bioconda channel.
Language:Shell0 0 00
nadiadavidson/geneLenDataBase
Language:R0 1 00
nadiadavidson/get_splice_counts
Language:C++0 1 01