/STAR_protocols_core_modules

Code accompanying STAR protocols publication describing the identification of core modules in a co-expression network using GWAS data

Primary LanguageHTML

A Computational Approach for Identification of Core Modules from a Co-expression Network and GWAS Data

Introduction

This vignette accompanies a publication describing the process of identifying modules enriched for core genes associated with a trait of interest using the results of a genome-wide association study (GWAS) for the trait of interest.

Insert graphical abstract here post-publication

Link to paper

Paper is not yet published, but will be linked here when it is.

How to use this repo

Option 1: Download the .html file and open it in your browser

This option does not require running any of the code to see the code and the output.

Option 2: Download the .Rmd file and run the code in RStudio

This option takes more time, and the dependent packages and data must be downloaded, however you can interact with the data using this option.

To dos

  • Share code with Cheryl