naotohori

I am a computational biophysicist working on RNA folding and RNA-protein interactions.

University of NottinghamNottingham, UK

Pinned Repositories

16S-central-folding
Language:Jupyter Notebook0 2 10
9fc
Fortranコンパイラを作ってみたい。
Language:Fortran0 2 00
Arena
Language:C++0 0 00
AzoKinetics
0 1 00
life-of-py
Watch out! Richard Parker is there. (These are all just for my personal use.)
Language:Python2 4 21
pca_imkl
Principal Component Analysis (PCA) using Intel Math Kernel Library
Language:Fortran1 2 00
TIS2AA
Construct atomistic (AA) model from Three-Interaction-Site (TIS) coarse-grained model of RNA/DNA
Language:Python2 2 01
vmd-scripts
VMD scripts
Language:Tcl7 2 03

naotohori's Repositories

naotohori/vmd-scripts
VMD scripts
Language:Tcl7 2 03
naotohori/life-of-py
Watch out! Richard Parker is there. (These are all just for my personal use.)
Language:Python2 4 21
naotohori/TIS2AA
Construct atomistic (AA) model from Three-Interaction-Site (TIS) coarse-grained model of RNA/DNA
Language:Python2 2 01
naotohori/pca_imkl
Principal Component Analysis (PCA) using Intel Math Kernel Library
Language:Fortran1 2 00
naotohori/16S-central-folding
Language:Jupyter Notebook0 2 10
naotohori/9fc
Fortranコンパイラを作ってみたい。
Language:Fortran0 2 00
naotohori/Arena
Language:C++0 0 00
naotohori/AzoKinetics
0 1 00
naotohori/fQCP
Fortran code of Quaternion Characteristic Polynomial (QCP) superposition method
Language:Fortran0 2 00
naotohori/BlendSciVis
Language:Python2 0
naotohori/Illustrate
Biomolecular Illustration Tool
Language:Fortran1 0
naotohori/lakers
Language:Fortran2 0
naotohori/lifeofpy
Language:Python2 0
naotohori/LinearFold
The new source code of the LinearFold, linear-time prediction for RNA secondary structures
Language:C++0 0
naotohori/Matisse
Language:Fortran2 0
naotohori/NAclub
2 0
naotohori/naotohori
Config files for my GitHub profile.
1 0
naotohori/naotohori.github.io
Language:CSS2 0
naotohori/notes
2 0
naotohori/POPS
POPS*: solvent accessible surface areas (SASAs) of proteins and nucleic acids
Language:C2 0
naotohori/process-book
Unix系システムのプロセスについて日本語で解説しています
Language:HTML2 0
naotohori/proteincollapsvis
Dynamic visualization of the collapsibility of proteins in PDB. See http://dx.doi.org/10.1039/C7SM00074J
Language:HTML2 0
naotohori/RNA_llps
code to perform coarse-grained simulations of RNA liquid-liquid phase separation
Language:Python1 0
naotohori/rnp32isgpu
Language:Cuda2 01
naotohori/SOP-GPU
Software package for simulations of biomolecules on GPU.
Language:C++2 0
naotohori/toml-f
TOML parser implementation for data serialization and deserialization in Fortran
Language:Fortran0 0