nargesr
Post-doc fellow researcher at the University of California, Irvine in the Mortazavi Lab
UC IrvineCalifornia
Pinned Repositories
gene_network_evaluation
Evaluation framework for computationally inferred gene networks from single-cell data.
PyWGCNA
PyWGCNA is a Python package designed to do Weighted Gene Correlation Network analysis (WGCNA)
Topyfic
Topyfic: Reproducible latent dirichlet allocation (LDA) using leiden clustering and harmony for single cell epigenomics data
TranscriptClean
Correct mismatches, microindels, and noncanonical splice junctions in long reads that have been mapped to the genome
AdvancedInformatics2021
Course materials for 2021
AdvancedInformaticsExercises
AdvancedInformaticsExercises_Rmarkdown
CVD_calculator
about globorisk and predict 10-year risk of cardiovascular disease
modelAD_piplines
Pipelines for analyzing model AD data in the Mortazavi lab
Topyfic_analysis
Data processing, analysis and figures for Topyfic paper
nargesr's Repositories
nargesr/CVD_calculator
about globorisk and predict 10-year risk of cardiovascular disease
nargesr/AdvancedInformatics2021
Course materials for 2021
nargesr/AdvancedInformaticsExercises
nargesr/AdvancedInformaticsExercises_Rmarkdown
nargesr/modelAD_piplines
Pipelines for analyzing model AD data in the Mortazavi lab
nargesr/Topyfic_analysis
Data processing, analysis and figures for Topyfic paper
nargesr/AdvancedInformaticsExercises_snakemake
nargesr/AdvancedInformaticsExercises_week5
nargesr/AdvancedInformaticsExercisesPiplineAnalyses
nargesr/al-folio
A beautiful, simple, clean, and responsive Jekyll theme for academics
nargesr/gene_network_evaluation
Evaluation framework for computationally inferred gene networks from single-cell data.
nargesr/GSEApy
Gene Set Enrichment Analysis in Python
nargesr/Math227C
Course notes for Math 227C Stochastic and Statistical Modeling for the Life Sciences, Spring 2020
nargesr/MCSBBootcampDry
nargesr/nargesr
Config files for my GitHub profile.
nargesr/nargesr.github.io