nasqar

Pinned Repositories

awesome-single-cell
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
0 2 01
ClusterProfShinyGSEA
A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries
Language:R17 2 78
ClusterProfShinyORA
A web-based application to perform Over-Representation Analysis (ORA) using clusterProfiler and shiny R libraries
Language:R12 3 06
deseq2shiny
a web-based R shiny application that wraps DESeq2 R package
Language:R15 2 47
GeneCountMerger
A preprocessing tool to merge gene count files
Language:R2 2 01
GeneidToNameFromGtf
R script for extracting gene ids and names from gtf file to csv
Language:R0 2 00
hack-spots
Using Sheetsee.js and power of collaboration to collect the best places to get your hack on.
Language:JavaScript0 1 00
NASQAR
NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization
Language:HTML31 2 611
seuratv3wizard
A web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on Seurat v3
Language:R33 8 1014
SeuratWizard
This is a web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on Seurat.
Language:R13 7 66

nasqar's Repositories

nasqar/seuratv3wizard
A web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on Seurat v3
Language:R33 8 1014
nasqar/NASQAR
NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization
Language:HTML31 2 611
nasqar/ClusterProfShinyGSEA
A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries
Language:R17 2 78
nasqar/deseq2shiny
a web-based R shiny application that wraps DESeq2 R package
Language:R15 2 47
nasqar/SeuratWizard
This is a web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on Seurat.
Language:R13 7 66
nasqar/ClusterProfShinyORA
A web-based application to perform Over-Representation Analysis (ORA) using clusterProfiler and shiny R libraries
Language:R12 3 06
nasqar/GeneCountMerger
A preprocessing tool to merge gene count files
Language:R2 2 01
nasqar/awesome-single-cell
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
0 2 01
nasqar/GeneidToNameFromGtf
R script for extracting gene ids and names from gtf file to csv
Language:R0 2 00
nasqar/hack-spots
Using Sheetsee.js and power of collaboration to collect the best places to get your hack on.
Language:JavaScript0 1 00
nasqar/moby
Moby Project - a collaborative project for the container ecosystem to assemble container-based systems
Language:Go1 0
nasqar/scPred
scPred package for cell type prediction from scRNA-seq data
Language:R1 0
nasqar/seurat
R toolkit for single cell genomics
Language:R1 0
nasqar/seuratOnline
seuratOnline
Language:R1 0
nasqar/STARTapp
The START App: R Shiny Transcriptome Analysis Resource Tool
Language:HTML2 0