Pinned Repositories
biocore_automated-pca
A collection of bash and R scripts intended to automate principle components analysis
biocore_documentation
Central repo for all non-project-specific documentation. Includes biocore best practices and guidelines.
cwl_development
a test repository to explore re-organizing and re-structing biocore_analysis
one-factor_deseq2
Repository for working with our DEseq2 R script
3D-RCAN
Three-dimensional residual channel attention networks
Accessing_public_genomic_data
Tutorials on accessing public reference and genomic data
asp.net_core
repo to test docker container creation with .net and vscode
awesome-nextflow
A curated list of nextflow based pipelines
blast_xml_parse
This is a small python script to parse the results of a large BLAST XML file.
nathanielmki's Repositories
nathanielmki/3D-RCAN
Three-dimensional residual channel attention networks
nathanielmki/awesome-nextflow
A curated list of nextflow based pipelines
nathanielmki/blast_xml_parse
This is a small python script to parse the results of a large BLAST XML file.
nathanielmki/benfordParse
Repo for Benford Law parsing
nathanielmki/bio-cwl-tools
nathanielmki/bioinfokit
Bioinformatics data analysis and visualization toolkit
nathanielmki/bioinformatics_online
Resource list and preparation instructions for online learning and teaching for Bioinformatics
nathanielmki/computer-science
:mortar_board: Path to a free self-taught education in Computer Science!
nathanielmki/cwl_development
a test repository to explore re-organizing and re-structing biocore_analysis
nathanielmki/cwl_tutorial
A brief intro to CWL and its usage, provided by commonwl.org
nathanielmki/dactl
Modern, fast and configurable Jekyll theme with some tricks up it's sleeve.
nathanielmki/designFileGen
nathanielmki/English-Persian-Word-Database
English Persian Word Database - Popular database extensions
nathanielmki/equidock_public
EquiDock: geometric deep learning for fast rigid 3D protein-protein docking
nathanielmki/Files
A modern file explorer that pushes the boundaries of the platform.
nathanielmki/genomics-r-intro
Intro to R and RStudio for Genomics
nathanielmki/GSEApy
Gene Set Enrichment Analysis in Python
nathanielmki/gseautomate
Repo to manage automation of GSEA through gseapy software and extensions
nathanielmki/Intro-to-rnaseq-hpc-salmon
nathanielmki/Intro-to-rnaseq-hpc-salmon-flipped
Introduction to bulk RNA-seq
nathanielmki/jekyll-theme-prologue
A Jekyll version of the "Prologue" theme by HTML5 UP
nathanielmki/Landmarks
Repo for Swift tutorial
nathanielmki/mdibl_cloud_control
nathanielmki/ml_tutorials
repo for tensorflow and keras tinkering
nathanielmki/molmil
WebGL based molecular viewer
nathanielmki/netZooR
netZooR is a network biology package implemented in R.
nathanielmki/r-novice-inflammation
Programming with R
nathanielmki/seuratAnalysisAxolotl
nathanielmki/uiTest1
repo to test basic ui customization in WinUI 3.0
nathanielmki/ZeroCostDL4Mic
ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy