Software for training probabilistic taxonomic classifier PROTAX
Note: if you can align your sequences, you might be interested using protaxA
References:
Somervuo P., Koskela S., Pennanen J., Nilsson H.R., Ovaskainen O. (2016) Unbiased probabilistic taxonomic classification for DNA barcoding. Bioinformatics 32(19):2920-7
Somervuo P., Yu D.W., Yu C.C.Y., Ji X.Y., Hultman J., Wirta H., Ovaskainen O. (2017) Quantifying uncertainty of taxonomic placement in DNA barcoding and metabarcoding. Methods in Ecology and Evolution 8(4):398-407