Pinned Repositories
.github
connectomes
[WIP] Unified interface to various backends used for hosting connectomes in the cloud.
fafbseg-py
Tools to work with the FlyWire connectome. Fully interoperable with navis.
fastcore
[WIP] Fast core functions for navis re-implemented in Cython.
navis
Python library for analysis of neuroanatomical data.
navis-flybrains
Transforms for navis that enable mapping between different Drosophila template brains.
navis-pipelines
Run navis pipelines described by YAML files.
pymaid
Python library to interface with CATMAID servers. Fully interoperable with navis.
skeletor
Extraction of 3D skeletons from meshes.
sparse-cubes
Marching cubes for sparse matrices
NAVis's Repositories
navis-org/skeletor
Extraction of 3D skeletons from meshes.
navis-org/navis
Python library for analysis of neuroanatomical data.
navis-org/pymaid
Python library to interface with CATMAID servers. Fully interoperable with navis.
navis-org/fafbseg-py
Tools to work with the FlyWire connectome. Fully interoperable with navis.
navis-org/navis-flybrains
Transforms for navis that enable mapping between different Drosophila template brains.
navis-org/connectomes
[WIP] Unified interface to various backends used for hosting connectomes in the cloud.
navis-org/sparse-cubes
Marching cubes for sparse matrices
navis-org/.github
navis-org/fastcore
[WIP] Fast core functions for navis re-implemented in Cython.
navis-org/navis-nblast-gpu
NBLAST running on the GPU using PyTorch [WIP]
navis-org/navis-pipelines
Run navis pipelines described by YAML files.
navis-org/navis-nblast-large
Implementation of NBLAST for large datasets
navis-org/navis-nsim
Interface between navis and the NEURON simulator
navis-org/navis-mousebrains
Template brains and transforms for mouse brains
navis-org/octarine-navis-plugin
Octarine plugin to visualize navis objects
navis-org/pymaid_template
A starter kit for people using python-catmaid for neuronal analysis