Pinned Repositories
data-models
Schema.org Data Models for HTAN
dsa-htan
Analytics and Integration Scripts for Digital Slide Integration with Synapse for the Human Tumor Atlas Network (HTAN)
HTAN-data-curator
HTAN Data Ingest Shiny App
htan-portal
The HTAN Data Portal
htan-vitessce-proto
An example configuration based off 10x visium tutorial
htan-webassets
IDP
nf-vectra-to-htan
A NextFlow workflow to prepare Vectra mIF qptiff files for the HTAN DCC
s3batch-phi-detector
schematic
Package for biomedical data model and data ingress management
NCI Human Tumor Atlas Network (HTAN)'s Repositories
ncihtan/htan-webassets
ncihtan/IDP
ncihtan/s3batch-phi-detector
ncihtan/hsim
Command line tool for generating simulated HTAN metadata for the HTAN Data Portal.
ncihtan/htan-vitessce-proto
An example configuration based off 10x visium tutorial
ncihtan/htancensor
A tool to de-identify tiff-based file formats for the HTAN DCC
ncihtan/image-header-validation
Matching manifest metadata to those in image headers
ncihtan/metadata-explorer
ncihtan/s3-synapse-sync
Lambda function code to index files in S3 bucket by creating filehandles on Synapse
ncihtan/scripts