nerettilab/RepEnrich2

For non-model organism

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RadPa commented

Hi,
Can I use RepEnrich2 for the non-model organisms, for example, an invertebrate like Drosophila (not D. melanogaster).

Thank you

Good Day
Radhika

nskvir commented

Hi Radhika,

As long as you have a reference genome, and can provide annotation for repetitive elements from Repeatmasker (or using a custom bedfile as shown in the tutorial) you should be able to use RepEnrich2 for non-model organisms.

Best,
Nick

RadPa commented