/SlicerANTs

This extension implements ANTs Registration into Slicer

Primary LanguagePythonBSD 3-Clause "New" or "Revised" LicenseBSD-3-Clause

This repository is not maintained by ANTs developers

SlicerANTs

This extension implements ANTs Registration into Slicer

Dev

CDash: SlicerPreview

Instalation

Install from the Slicer Extension Manager.

Modules

  • antsRegistration: provides an interface for doing registration with ANTs. Generates parameters passed to the antsRegistrationCLI module.
  • antsRegistrationCLI: cli module that runs the command generated from antsRegistration module.

(Basic) Tutorial

  • Load volumes to register (for example MRBrainTumor1 and MRBrainTumor2 from Sample Data module)
  • Set MRBrainTumor1 in the fixed image selector, MRBrainTumor2 in the moving image selector and select Rigid from the Stages (Presets).
  • Choose a Transformed Volume to specify the output
  • Click the Run Registration button and wait for the registration to finish.

Example

The following is an example CT to MR rigid registration.

Pre

Post

Example

References