Almost all CTDs are not available

[AMCalejandro]

Hi,

Most of the CTD datasets are actually not available.....

I wonder if this has an easy fix.... It would be so helpful.

ctd_name = c("ctd_AIBS", "ctd_allKI", "ctd_BlueLake2018_FrontalCortexOnly",
    "ctd_BlueLake2018_VisualCortexOnly", "ctd_DivSeq", "ctd_DRONC_human",
    "ctd_DRONC_mouse", "ctd_Saunders", "ctd_Tasic", "ctd_Zeisel2015", "ctd_Zeisel2018",
    "ctd_TabulaMuris", "ctd_Aerts2018", "ctd_Aerts2021", "ctd_Avalos2019",
    "ctd_DescartesHuman", "ctd_DescartesHuman_brain", "ctd_HumanCellLandscape",
    "ctd_Jiang2021", "ctd_Han2022", "ctd_Cao2019", "ctd_Raj2018", "ctd_Raj2018",
    "ctd_Farnsworth2020")

save = lapply(ctd_name, function(x) {
  store = try(MAGMA.Celltyping::get_ctd(x))
})

[AMCalejandro]

Added a PR to fix

[AMCalejandro]

Making sure the user has a personal access token makes download to work

[bschilder]

This has been a recurrent issue with piggyback:
ropensci/piggyback#49

What version of piggyback / R / MAGMA.Celltyping were you using?

In the future, please use the ISSUES template when reporting bugs. This will help developers to better assess and fix the issues.